Delila Program: dops

dops program

Documentation for the dops program is below, with links to related programs in the "see also" section.

{   version = 2.80; (* of dops.p 2010 Nov 03}

(* begin module describe.dops *)
(*
name
   dops: pascal graphics library and preprocessor for postscript

synopsis
   dops(demo: in, input: in, output: out)

files
   demo: a file for demonstration of the program.
      Start dops interactively.  Start a picture with
          .PS 81 2 2
      then type
          demo
      Graphics instructions will be read from the file 'demo', and the
      corresponding postscript will appear on the output.
      You can try instructions by hand.  Then type
          .PE
          ^d (control-d)
      to conclude.
   input: Graphics instructions.  Portions surrounded by .PS (with
      the appropriate parameters) and .PE (.PS =picture start and .PE =
      picture end) are searched for function names.  When a function
      name is found, the parameters on the same line are read.
   output: the functions detected within .PS to .PE
      are translated into PostScript graphics

description
   Dops converts the graphical instructions made by modules from
   domod.p and produces graphics in the language PostScript.

examples
   To demonstrate the 3-D graphics, use
     .PS 81 2 2
     test3d
     .PE
     (control-d to leave the program)
   A complete test file is called 'demo', which should be run
   non-interactively.

documentation

@article{Schneider1982,
author = "T. D. Schneider
 and G. D. Stormo
 and J. S. Haemer
 and L. Gold",
title = "A design for computer nucleic-acid sequence storage, retrieval and
manipulation",
year = "1982",
journal = "Nucleic Acids Research",
volume = "10",
pages = "3013-3024"}

@article{Schneider1984,
author = "T. D. Schneider
 and G. D. Stormo
 and M. A. Yarus
 and L. Gold",
title = "Delila system tools",
year = "1984",
journal = "Nucleic Acids Research",
volume = "12",
pages = "129-140"}

see also
   doodle.p, domod.p, dosun.p
   PostScript Language Tutorial and Cookbook,
   PostScript Language Language Reference Manual
   both from Addison Wesley, 1985
   dops.demo - file that demonstrates all functions
   xyplo.p - uses colors in plots.

author
  Dr. Thomas D. Schneider
  National Cancer Institute
  Laboratory of Experimental and Computational Biology
  Frederick, Maryland  21702-1201
  toms@ncifcrf.gov
  permanent email: toms@alum.mit.edu
  http://www.lecb.ncifcrf.gov/~toms/

bugs
   none known

technical notes

   NONSTANDARD is a comment that means that this portion of the code is
   dependent on non-standard pascal (or graphics) for its function.

   See routine setcolor for a discussion of how colors are converted to a
   spectrum.

*)
(* end module describe.dops *)
{This manual page was created by makman 1.44}
{created by htmlink 1.55}
National Cancer Institute    National Institutes of Health    Health and Human Services    USA Gov - Official Web Portal    Viewing Files    Accessibility